Sequence Similarity Clusters for the Entities in PDB 1MPG

Entity #1 | Chains: A,B
3-METHYLADENINE DNA GLYCOSYLASE II protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 1000
95 % 1 14 1259 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 1 14 1287
70 % 1 14 1307
50 % 1 14 1356
40 % 1 14 1363
30 % 1 14 1342

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.