Sequence Similarity Clusters for the Entities in PDB 1MPG

Entity #1 | Chains: A,B
3-METHYLADENINE DNA GLYCOSYLASE II protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 1035
95 % 1 14 1288 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 1 14 1318
70 % 1 14 1340
50 % 1 14 1387
40 % 1 14 1394
30 % 1 14 1369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures