Sequence Similarity Clusters for the Entities in PDB 1MPF

Entity #1 | Chains: A
MATRIX PORIN OUTER MEMBRANE PROTEIN F protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52835
95 % 16 32 493 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 16 32 529
70 % 16 32 569
50 % 22 53 311
40 % 22 53 326
30 % 22 53 335

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.