Sequence Similarity Clusters for the Entities in PDB 1MPA

Entity #1 | Chains: L
MN12H2 IGG2A-KAPPA protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27260
95 % 96 145 147
90 % 104 155 149
70 % 1166 2280 1
50 % 2385 4619 1
40 % 2385 4619 1
30 % 2729 5440 1
Entity #2 | Chains: H
MN12H2 IGG2A-KAPPA protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27126
95 % 1 3 22645
90 % 1 3 21972
70 % 1160 2238 2
50 % 2386 4619 1
40 % 2386 4619 1
30 % 2730 5440 1
Entity #3 | Chains: P
PORA P1.16 PEPTIDE FLUORESCEIN CONJUGATE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.