Sequence Similarity Clusters for the Entities in PDB 1MPA

Entity #1 | Chains: L
MN12H2 IGG2A-KAPPA protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25270
95 % 91 138 145
90 % 94 143 150
70 % 894 1710 2
50 % 2186 4166 1
40 % 2186 4167 1
30 % 2484 4915 1
Entity #2 | Chains: H
MN12H2 IGG2A-KAPPA protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25153
95 % 1 3 20998
90 % 1 3 20395
70 % 1063 2016 1
50 % 2187 4166 1
40 % 2187 4167 1
30 % 2485 4915 1
Entity #3 | Chains: P
PORA P1.16 PEPTIDE FLUORESCEIN CONJUGATE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.