Sequence Similarity Clusters for the Entities in PDB 1MP4

Entity #1 | Chains: A,B
W224H Variant of S. Enterica RmlA Bound to UDP-Glucose protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2615
95 % 6 7 2601 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 14 15 1670
70 % 50 54 240
50 % 53 58 244
40 % 53 58 274
30 % 60 68 251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures