Sequence Similarity Clusters for the Entities in PDB 1MP4

Entity #1 | Chains: A,B
W224H Variant of S. Enterica RmlA Bound to UDP-Glucose protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2484
95 % 6 7 2434 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.0
PDBFlex
90 % 14 15 1548
70 % 49 53 235
50 % 52 57 232
40 % 52 57 257
30 % 59 67 238

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures