Sequence Similarity Clusters for the Entities in PDB 1MOX

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 9920
95 % 1 3 9722 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 2.7
PDBFlex
90 % 1 3 9593
70 % 1 3 9153
50 % 1 3 8333
40 % 8 42 947
30 % 9 44 894
Entity #2 | Chains: C,D
Transforming Growth Factor alpha protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 8034
95 % 2 7 8106 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 7 8035
70 % 2 7 7762
50 % 2 22 2365
40 % 2 22 2335
30 % 2 22 2192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures