Sequence Similarity Clusters for the Entities in PDB 1MOX

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 7834
95 % 1 3 8332 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 3 8278
70 % 1 3 7972
50 % 1 3 7333
40 % 8 37 994
30 % 8 37 968
Entity #2 | Chains: C,D
Transforming Growth Factor alpha protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 7554
95 % 2 7 8127 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 7 8080
70 % 2 7 7807
50 % 2 22 2251
40 % 2 22 2238
30 % 2 22 2134

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.