Sequence Similarity Clusters for the Entities in PDB 1MOX

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10167
95 % 1 3 9955 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 2.7
PDBFlex
90 % 1 3 9818
70 % 1 3 9388
50 % 1 3 8557
40 % 8 43 960
30 % 9 45 907
Entity #2 | Chains: C,D
Transforming Growth Factor alpha protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 8250
95 % 2 7 8298 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 7 8219
70 % 2 7 7949
50 % 2 22 2426
40 % 2 22 2385
30 % 2 22 2237

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures