Sequence Similarity Clusters for the Entities in PDB 1MOX

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 7976
95 % 1 3 8454 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 3 8396
70 % 1 3 8084
50 % 1 3 7443
40 % 8 37 1006
30 % 8 37 986
Entity #2 | Chains: C,D
Transforming Growth Factor alpha protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 7692
95 % 2 7 8249 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 7 8198
70 % 2 7 7917
50 % 2 22 2302
40 % 2 22 2291
30 % 2 22 2180

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures