Sequence Similarity Clusters for the Entities in PDB 1MOX

Entity #1 | Chains: A,B
Epidermal Growth Factor Receptor protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 10447
95 % 1 3 10233 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 2.7
PDBFlex
90 % 1 3 10085
70 % 1 3 9615
50 % 1 3 8724
40 % 9 44 974
30 % 10 46 913
Entity #2 | Chains: C,D
Transforming Growth Factor alpha protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 8476
95 % 2 7 8532 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 7 8445
70 % 2 7 8158
50 % 2 22 2480
40 % 2 22 2432
30 % 2 22 2279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures