Sequence Similarity Clusters for the Entities in PDB 1MOD

Entity #1 | Chains: A
MYOGLOBIN protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28805
95 % 204 269 121 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 204 269 125
70 % 278 374 73
50 % 278 376 100
40 % 288 386 121
30 % 499 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures