Sequence Similarity Clusters for the Entities in PDB 1MNF

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
groEL protein protein, length: 547 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 21 62
95 % 12 43 13 Flexibility: Medium
Max RMSD: 15.0, Avg RMSD: 5.6
PDBFlex
90 % 12 43 14
70 % 12 43 22
50 % 16 50 17
40 % 16 50 27
30 % 16 50 44
Entity #2 | Chains: 1,2,O,P,Q,R,S,T,U,V,W,X,Y,Z
12-residue peptide substrate protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.