Sequence Similarity Clusters for the Entities in PDB 1MN8

Entity #1 | Chains: A,B,C,D
Core protein p15 protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24515
95 % 1 1 20902 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 20307
70 % 1 1 18644
50 % 1 1 16173
40 % 1 1 14409
30 % 1 1 12330

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures