Sequence Similarity Clusters for the Entities in PDB 1MMS

Entity #1 | Chains: C,D
23S RIBOSOMAL RNA rna, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
PROTEIN (RIBOSOMAL PROTEIN L11) protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 19 2337
95 % 1 21 2628
90 % 1 21 2672
70 % 1 24 2224
50 % 7 214 135
40 % 7 217 150
30 % 7 220 165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.