Sequence Similarity Clusters for the Entities in PDB 1MMP

Entity #1 | Chains: A,B
GELATINASE A protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 11007
95 % 4 6 10992 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 4 6 10844
70 % 4 6 10294
50 % 152 232 103
40 % 155 236 125
30 % 155 236 132

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures