Sequence Similarity Clusters for the Entities in PDB 1MMO

Entity #1 | Chains: B,C
METHANE MONOOXYGENASE HYDROLASE (BETA CHAIN) protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31690
95 % 11 27 827
90 % 11 27 860
70 % 11 27 896
50 % 12 29 907
40 % 12 29 932
30 % 12 29 919
Entity #2 | Chains: D,E
METHANE MONOOXYGENASE HYDROLASE (ALPHA CHAIN) protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 15800
95 % 11 27 819
90 % 11 27 852
70 % 12 29 863
50 % 12 29 901
40 % 12 29 930
30 % 12 29 916
Entity #3 | Chains: G,H
METHANE MONOOXYGENASE HYDROLASE (GAMMA CHAIN) protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20834
95 % 11 27 843
90 % 11 27 877
70 % 11 27 907
50 % 12 29 916
40 % 12 29 943
30 % 12 29 928

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.