Sequence Similarity Clusters for the Entities in PDB 1MMO

Entity #1 | Chains: B,C
METHANE MONOOXYGENASE HYDROLASE (BETA CHAIN) protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32123
95 % 11 27 857
90 % 11 27 889
70 % 11 27 919
50 % 12 29 932
40 % 12 29 951
30 % 12 29 930
Entity #2 | Chains: D,E
METHANE MONOOXYGENASE HYDROLASE (ALPHA CHAIN) protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 16038
95 % 11 27 848
90 % 11 27 880
70 % 12 29 887
50 % 12 29 927
40 % 12 29 948
30 % 12 29 927
Entity #3 | Chains: G,H
METHANE MONOOXYGENASE HYDROLASE (GAMMA CHAIN) protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21110
95 % 11 27 873
90 % 11 27 905
70 % 11 27 930
50 % 12 29 941
40 % 12 29 962
30 % 12 29 939

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.