Sequence Similarity Clusters for the Entities in PDB 1MMI

Entity #1 | Chains: A,B
DNA polymerase III, beta chain protein, length: 366 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 42 377
95 % 10 48 399 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 10 48 432
70 % 10 48 458
50 % 10 51 441
40 % 10 52 459
30 % 12 57 424

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures