Sequence Similarity Clusters for the Entities in PDB 1MMF

Entity #1 | Chains: A,L
glycerol dehydrase alpha subunit protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 16586
95 % 2 2 15351
90 % 2 2 15058
70 % 10 10 2985
50 % 10 10 2938
40 % 10 10 2899
30 % 10 10 2719
Entity #2 | Chains: B,E
glycerol dehydrase beta subunit protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41382
95 % 2 2 18576
90 % 2 2 18098
70 % 2 2 16723
50 % 2 2 14540
40 % 2 2 12955
30 % 2 2 11081
Entity #3 | Chains: G,M
glycerol dehydrase gamma subunit protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22606
95 % 2 2 19455
90 % 2 2 18927
70 % 2 2 17457
50 % 2 2 15172
40 % 2 2 13515
30 % 2 2 11556

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.