Sequence Similarity Clusters for the Entities in PDB 1MMF

Entity #1 | Chains: A,L
glycerol dehydrase alpha subunit protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 15483
95 % 2 2 14351
90 % 2 2 14087
70 % 10 10 2813
50 % 10 10 2759
40 % 10 10 2729
30 % 10 10 2568
Entity #2 | Chains: B,E
glycerol dehydrase beta subunit protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38900
95 % 2 2 17396
90 % 2 2 16963
70 % 2 2 15721
50 % 2 2 13732
40 % 2 2 12234
30 % 2 2 10471
Entity #3 | Chains: G,M
glycerol dehydrase gamma subunit protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21166
95 % 2 2 18223
90 % 2 2 17747
70 % 2 2 16430
50 % 2 2 14347
40 % 2 2 12784
30 % 2 2 10946

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.