Sequence Similarity Clusters for the Entities in PDB 1MMF

Entity #1 | Chains: A,L
glycerol dehydrase alpha subunit protein, length: 555 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 15275
95 % 2 2 14170
90 % 2 2 13907
70 % 10 10 2767
50 % 10 10 2715
40 % 10 10 2688
30 % 10 10 2526
Entity #2 | Chains: B,E
glycerol dehydrase beta subunit protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38416
95 % 2 2 17169
90 % 2 2 16742
70 % 2 2 15535
50 % 2 2 13570
40 % 2 2 12094
30 % 2 2 10357
Entity #3 | Chains: G,M
glycerol dehydrase gamma subunit protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20902
95 % 2 2 17992
90 % 2 2 17524
70 % 2 2 16237
50 % 2 2 14174
40 % 2 2 12634
30 % 2 2 10823

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.