Sequence Similarity Clusters for the Entities in PDB 1MM9

Entity #1 | Chains: A
Streptavidin protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56343
95 % 66 146 86 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 68 149 83
70 % 68 149 105
50 % 68 150 135
40 % 78 196 106
30 % 84 205 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures