Sequence Similarity Clusters for the Entities in PDB 1MLC

Entity #1 | Chains: A,C
IGG1-KAPPA D44.1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19811
95 % 22 25 1750
90 % 25 32 1266
70 % 780 1752 2
50 % 1919 4272 1
40 % 1919 4272 1
30 % 2155 5038 1
Entity #2 | Chains: B,D
IGG1-KAPPA D44.1 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25834
95 % 2 2 21547
90 % 5 12 3375
70 % 931 2066 1
50 % 1920 4272 1
40 % 1920 4272 1
30 % 2156 5038 1
Entity #3 | Chains: E,F
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 554 625 3
95 % 605 678 4
90 % 617 695 5
70 % 824 911 6
50 % 830 919 6
40 % 859 953 10
30 % 859 953 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.