Sequence Similarity Clusters for the Entities in PDB 1MLC

Entity #1 | Chains: A,C
IGG1-KAPPA D44.1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20988
95 % 22 25 1862
90 % 26 33 1298
70 % 1003 2280 1
50 % 2051 4619 1
40 % 2051 4619 1
30 % 2308 5440 1
Entity #2 | Chains: B,D
IGG1-KAPPA D44.1 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27307
95 % 2 2 22771
90 % 6 13 3132
70 % 995 2238 2
50 % 2052 4619 1
40 % 2052 4619 1
30 % 2309 5440 1
Entity #3 | Chains: E,F
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 576 650 3
95 % 627 703 4
90 % 639 720 5
70 % 847 937 7
50 % 853 945 7
40 % 882 979 11
30 % 882 979 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.