Sequence Similarity Clusters for the Entities in PDB 1MLC

Entity #1 | Chains: A,C
IGG1-KAPPA D44.1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 20117
95 % 22 25 1791
90 % 25 32 1294
70 % 791 1775 2
50 % 1970 4367 1
40 % 1970 4367 1
30 % 2214 5151 1
Entity #2 | Chains: B,D
IGG1-KAPPA D44.1 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26202
95 % 2 2 21837
90 % 5 12 3428
70 % 955 2111 1
50 % 1971 4367 1
40 % 1971 4367 1
30 % 2215 5151 1
Entity #3 | Chains: E,F
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 559 631 3
95 % 610 684 4
90 % 622 701 5
70 % 829 917 6
50 % 835 925 6
40 % 864 959 11
30 % 864 959 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.