Sequence Similarity Clusters for the Entities in PDB 1MLC

Entity #1 | Chains: A,C
IGG1-KAPPA D44.1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23985
95 % 20 22 1886
90 % 23 26 1425
70 % 693 1568 3
50 % 1704 3813 1
40 % 1705 3814 1
30 % 1922 4537 1
Entity #2 | Chains: B,D
IGG1-KAPPA D44.1 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23889
95 % 2 2 20008
90 % 5 12 3088
70 % 832 1850 1
50 % 1705 3813 1
40 % 1706 3814 1
30 % 1923 4537 1
Entity #3 | Chains: E,F
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 502 571 3
95 % 553 624 4
90 % 565 641 5
70 % 772 856 6
50 % 778 865 6
40 % 807 899 10
30 % 807 899 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.