Sequence Similarity Clusters for the Entities in PDB 1MLC

Entity #1 | Chains: A,C
IGG1-KAPPA D44.1 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 19632
95 % 22 25 1727
90 % 25 32 1255
70 % 771 1729 2
50 % 1899 4220 1
40 % 1899 4221 1
30 % 2123 4972 1
Entity #2 | Chains: B,D
IGG1-KAPPA D44.1 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25579
95 % 2 2 21336
90 % 5 12 3358
70 % 921 2041 1
50 % 1900 4220 1
40 % 1900 4221 1
30 % 2124 4972 1
Entity #3 | Chains: E,F
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 547 618 3
95 % 598 671 4
90 % 610 688 5
70 % 817 904 6
50 % 823 912 6
40 % 852 946 10
30 % 852 946 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.