1ML3

Evidences for a flip-flop catalytic mechanism of Trypanosoma cruzi glyceraldehyde-3-phosphate dehydrogenase, from its crystal structure in complex with reacted irreversible inhibitor 2-(2-phosphono-ethyl)-acrylic acid 4-nitro-phenyl ester


Sequence Similarity Clusters for the Entities in PDB 1ML3

Entity #1 | Chains: A,B,C,D
Glyceraldehyde 3-phosphate dehydrogenase, glycosomal protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 3081
95 % 5 6 3204 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 7 2485
70 % 5 12 1180
50 % 97 147 76
40 % 97 147 97
30 % 97 147 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3IDS 1 A, B, C, D Glyceraldehyde-3-phosphate dehydrogenase, glycosomal 5693 1.2.1.12 | Details
2 1K3T 1 A, B, C, D Glyceraldehyde-3-phosphate dehydrogenase 5693 1.2.1.12 | Details
3 3DMT 1 A, B, D Glyceraldehyde-3-phosphate dehydrogenase, glycosomal 5693 1.2.1.12 | Details
4 3DMT 2 C Glyceraldehyde-3-phosphate dehydrogenase, glycosomal 5693 1.2.1.12 | Details
5 1ML3 1 A, B, C, D Glyceraldehyde 3-phosphate dehydrogenase, glycosomal 5693 1.2.1.12 | Details
6 1QXS 1 A, B, C, D Glyceraldehyde 3-phosphate dehydrogenase, glycosomal 5693 1.2.1.12 | Details