Sequence Similarity Clusters for the Entities in PDB 1ML0

Entity #1 | Chains: A
M3 Protein protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8503
95 % 4 4 8898 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 4 8827
70 % 4 4 8485
50 % 4 4 7749
40 % 4 4 7174
30 % 4 4 6376
Entity #2 | Chains: D
Small Inducible Cytokine protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73874
95 % 8 11 4427 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 11 4467
70 % 8 14 3358
50 % 10 19 2445
40 % 28 59 349
30 % 32 65 292

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures