Sequence Similarity Clusters for the Entities in PDB 1ML0

Entity #1 | Chains: A
M3 Protein protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9148
95 % 4 4 9090 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 4 8992
70 % 4 4 8641
50 % 4 4 7890
40 % 4 4 7232
30 % 4 4 6297
Entity #2 | Chains: D
Small Inducible Cytokine protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 6395
95 % 8 11 4061 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 11 4114
70 % 8 14 3311
50 % 10 19 2415
40 % 29 59 362
30 % 35 71 291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures