Sequence Similarity Clusters for the Entities in PDB 1ML0

Entity #1 | Chains: A
M3 Protein protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8291
95 % 4 4 8693 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 4 4 8627
70 % 4 4 8309
50 % 4 4 7593
40 % 4 4 7032
30 % 4 4 6248
Entity #2 | Chains: D
Small Inducible Cytokine protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72580
95 % 8 11 4326 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 11 4356
70 % 8 14 3284
50 % 10 19 2371
40 % 28 58 331
30 % 32 64 290

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures