Sequence Similarity Clusters for the Entities in PDB 1MKV

Entity #1 | Chains: A
PHOSPHOLIPASE A2 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 5955
95 % 14 32 1715 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 14 32 1756
70 % 20 63 698
50 % 34 122 318
40 % 97 307 100
30 % 97 307 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures