Sequence Similarity Clusters for the Entities in PDB 1MKV

Entity #1 | Chains: A
PHOSPHOLIPASE A2 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 19 3151
95 % 14 32 1795 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 14 32 1836
70 % 20 63 717
50 % 34 122 346
40 % 98 309 103
30 % 98 309 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures