Sequence Similarity Clusters for the Entities in PDB 1MKQ

Entity #1 | Chains: A
Cytochrome c Peroxidase protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 19527
95 % 99 224 129 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.5
PDBFlex
90 % 99 224 134
70 % 99 224 154
50 % 99 224 187
40 % 99 224 201
30 % 99 224 214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.