Sequence Similarity Clusters for the Entities in PDB 1MKO

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 135 203 24
95 % 159 234 31
90 % 160 235 32
70 % 194 315 17
50 % 458 714 5
40 % 463 719 8
30 % 874 1158 8
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 102 155 51
95 % 166 234 30
90 % 169 239 29
70 % 210 329 11
50 % 459 714 5
40 % 464 719 8
30 % 875 1158 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.