Sequence Similarity Clusters for the Entities in PDB 1MKM

Entity #1 | Chains: A,B
IclR transcriptional regulator protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39392
95 % 1 1 30404 Flexibility: High
Max RMSD: 16.0, Avg RMSD: 16.0
PDBFlex
90 % 1 1 29327
70 % 1 1 26413
50 % 1 1 22578
40 % 1 1 19879
30 % 1 1 16849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures