Sequence Similarity Clusters for the Entities in PDB 1MKK

Entity #1 | Chains: A,B
Vascular Endothelial Growth Factor A protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46396
95 % 1 34 413 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.9
PDBFlex
90 % 1 34 447
70 % 1 36 451
50 % 1 39 509
40 % 1 43 512
30 % 1 48 474

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.