Sequence Similarity Clusters for the Entities in PDB 1MKJ

Entity #1 | Chains: A
KINESIN HEAVY CHAIN protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 3082
95 % 7 13 2203 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.3
PDBFlex
90 % 7 13 2265
70 % 8 21 1431
50 % 12 25 1261
40 % 81 146 227
30 % 89 166 225

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1BG2 1 A KINESIN MOTOR DOMAIN 9606
2 5LT0 1 A Kinesin-like protein 9606
3 4LNU 4 K Kinesin-1 heavy chain UNP RESIDUES 1-325 9606
4 5LT2 1 A, B, C, D, E, K Kinesin-like protein 9606
5 5LT3 1 A, B, C, D, E, K Kinesin-1 heavy chain 9606
6 1MKJ 1 A KINESIN HEAVY CHAIN Residues 1-349 9606
7 4HNA 4 K Kinesin-1 heavy chain RESIDUES 1-349 9606
8 3J8X 1 K Kinesin-1 heavy chain Truncated catalytic head domain (monomeric, UNP residues 1-349) 9606
9 3J8Y 1 K Kinesin-1 heavy chain Truncated catalytic head domain (monomeric, UNP residues 1-349) 9606
10 2P4N 1 K Kinesin heavy chain K349 Construct of Human Kinesin 9606