Sequence Similarity Clusters for the Entities in PDB 1MKJ

Entity #1 | Chains: A
KINESIN HEAVY CHAIN protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2903
95 % 7 13 2070 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 2.6
PDBFlex
90 % 7 13 2122
70 % 8 21 1330
50 % 12 25 1194
40 % 77 137 230
30 % 85 157 226

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures