Sequence Similarity Clusters for the Entities in PDB 1MKD

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Phosphodiesterase 4D protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 4473
95 % 40 40 252
90 % 40 40 261
70 % 78 78 175
50 % 78 78 213
40 % 78 78 235
30 % 242 247 75

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.