Sequence Similarity Clusters for the Entities in PDB 1MKB

Entity #1 | Chains: A,B
BETA-HYDROXYDECANOYL THIOL ESTER DEHYDRASE protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13310
95 % 3 3 12738 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 3 12524
70 % 7 7 3182
50 % 9 14 783
40 % 9 14 816
30 % 9 14 802

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.