Sequence Similarity Clusters for the Entities in PDB 1MKB

Entity #1 | Chains: A,B
BETA-HYDROXYDECANOYL THIOL ESTER DEHYDRASE protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12450
95 % 3 3 11930 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 3 11758
70 % 7 7 3195
50 % 9 14 816
40 % 9 14 841
30 % 9 14 837

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures