Sequence Similarity Clusters for the Entities in PDB 1MK9

Entity #1 | Chains: A,C,E,G
Integrin Beta3 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,D,F,H
TALIN protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8897
95 % 5 5 4622 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 5 5 4642
70 % 7 7 3626
50 % 7 7 3547
40 % 7 7 3424
30 % 7 7 3193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.