Sequence Similarity Clusters for the Entities in PDB 1MK8

Entity #1 | Chains: A
Cytochrome c Peroxidase protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 34 1230
95 % 98 224 138 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 98 224 145
70 % 98 224 168
50 % 98 224 203
40 % 98 224 218
30 % 137 303 166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures