Sequence Similarity Clusters for the Entities in PDB 1MK7

Entity #1 | Chains: A,C
Integrin Beta3 protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,D
TALIN protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 8965
95 % 3 5 4665 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 3 5 4683
70 % 4 7 3652
50 % 4 7 3571
40 % 4 7 3447
30 % 4 7 3214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.