Sequence Similarity Clusters for the Entities in PDB 1MK5

Entity #1 | Chains: A,B
Streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 122 99
95 % 25 144 77 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 26 147 78
70 % 26 147 97
50 % 26 148 126
40 % 32 194 101
30 % 34 203 110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures