Sequence Similarity Clusters for the Entities in PDB 1MK4

Entity #1 | Chains: A,B
Hypothetical protein yqjY protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45168
95 % 1 1 34042 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 32506
70 % 1 1 28956
50 % 1 1 24669
40 % 1 1 21701
30 % 1 1 18376

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures