Sequence Similarity Clusters for the Entities in PDB 1MK4

Entity #1 | Chains: A,B
Hypothetical protein yqjY protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44306
95 % 1 1 33439 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 31956
70 % 1 1 28488
50 % 1 1 24300
40 % 1 1 21376
30 % 1 1 18107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures