Sequence Similarity Clusters for the Entities in PDB 1MK4

Entity #1 | Chains: A,B
Hypothetical protein yqjY protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46408
95 % 1 1 38591 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 36796
70 % 1 1 32625
50 % 1 1 27726
40 % 1 1 24307
30 % 1 1 20242

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures