Sequence Similarity Clusters for the Entities in PDB 1MK2

Entity #1 | Chains: A
SMAD 3 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20490
95 % 5 6 7385
90 % 5 6 7349
70 % 6 8 3903
50 % 6 8 3789
40 % 6 8 3630
30 % 6 8 3376
Entity #2 | Chains: B
Madh-interacting protein protein, length: 38 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 28729
95 % 2 2 23814
90 % 2 2 23057
70 % 2 2 21104
50 % 2 2 18330
40 % 2 2 16327
30 % 2 2 14002

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.