Sequence Similarity Clusters for the Entities in PDB 1MJV

Entity #1 | Chains: A,B
Vascular Endothelial Growth Factor A protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48979
95 % 12 35 465 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.9
PDBFlex
90 % 12 35 501
70 % 12 37 514
50 % 14 40 530
40 % 16 44 535
30 % 16 49 494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures