Sequence Similarity Clusters for the Entities in PDB 1MJU

Entity #1 | Chains: L
IMMUNOGLOBULIN MS6-12 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26557
95 % 1 12 3612 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 1 32 953
70 % 2 1822 2
50 % 3 4489 1
40 % 3 4489 1
30 % 3 5290 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS6-12 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26405
95 % 1 2 22040 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 7 7397
70 % 2 2172 1
50 % 4 4489 1
40 % 4 4489 1
30 % 4 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.