Sequence Similarity Clusters for the Entities in PDB 1MJP

Entity #1 | Chains: C
CONSENSUS OPERATOR DUPLEX dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
CONSENSUS OPERATOR DUPLEX dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
METHIONINE REPRESSOR protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 1988
95 % 10 10 1894
90 % 10 10 1940
70 % 10 10 1962
50 % 10 10 1974
40 % 10 10 1967
30 % 10 10 1900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.