Sequence Similarity Clusters for the Entities in PDB 1MJP

Entity #1 | Chains: C
CONSENSUS OPERATOR DUPLEX dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
CONSENSUS OPERATOR DUPLEX dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
METHIONINE REPRESSOR protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 1879
95 % 10 10 1808
90 % 10 10 1853
70 % 10 10 1878
50 % 10 10 1890
40 % 10 10 1892
30 % 10 10 1819

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.