Sequence Similarity Clusters for the Entities in PDB 1MJJ

Entity #1 | Chains: A,L
IMMUNOGLOBULIN MS6-12 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27430
95 % 3 12 3718 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 17 32 973
70 % 531 2287 1
50 % 1097 4633 1
40 % 1097 4633 1
30 % 1215 5461 1
Entity #2 | Chains: B,H
IMMUNOGLOBULIN MS6-12 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27272
95 % 2 2 22779 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 4 7 7660
70 % 531 2244 2
50 % 1098 4633 1
40 % 1098 4633 1
30 % 1216 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.