Sequence Similarity Clusters for the Entities in PDB 1MJI

Entity #1 | Chains: C,D
5S rRNA fragment rna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
50S ribosomal protein L5 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 141 80
95 % 2 153 84
90 % 2 153 89
70 % 2 177 89
50 % 4 321 60
40 % 4 321 75
30 % 4 321 87

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.