Sequence Similarity Clusters for the Entities in PDB 1MJG

Entity #1 | Chains: A,B,C,D
CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT protein, length: 674 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2830
95 % 4 5 3490 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 5 3556
70 % 4 5 3521
50 % 4 5 3427
40 % 16 19 1495
30 % 16 19 1477
Entity #2 | Chains: M,N,O,P
Carbon monoxide dehydrogenase alpha subunit protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17154
95 % 4 5 3487 Flexibility: Low
Max RMSD: 7.5, Avg RMSD: 1.7
PDBFlex
90 % 4 5 3554
70 % 4 6 3375
50 % 4 6 3289
40 % 4 6 3201
30 % 4 6 3000

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures