Sequence Similarity Clusters for the Entities in PDB 1MJG

Entity #1 | Chains: A,B,C,D
CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT protein, length: 674 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2707
95 % 4 5 3365 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 5 3419
70 % 4 5 3386
50 % 4 5 3302
40 % 16 18 1567
30 % 16 18 1545
Entity #2 | Chains: M,N,O,P
Carbon monoxide dehydrogenase alpha subunit protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16490
95 % 4 5 3362 Flexibility: Low
Max RMSD: 7.5, Avg RMSD: 1.7
PDBFlex
90 % 4 5 3417
70 % 4 6 3243
50 % 4 6 3164
40 % 4 6 3085
30 % 4 6 2891

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.