Sequence Similarity Clusters for the Entities in PDB 1MJF

Entity #1 | Chains: A,B
spermidine synthase protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37467
95 % 1 1 29248 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 28220
70 % 1 3 5605
50 % 1 3 5290
40 % 1 3 4978
30 % 11 36 501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures