Sequence Similarity Clusters for the Entities in PDB 1MJ8

Entity #1 | Chains: L
IMMUNOGLOBULIN MS6-126 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59666
95 % 2 12 3718 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 4 32 973
70 % 126 2287 1
50 % 263 4633 1
40 % 263 4633 1
30 % 281 5461 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS6-126 protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58939
95 % 1 2 22751
90 % 3 7 7660
70 % 129 2244 2
50 % 264 4633 1
40 % 264 4633 1
30 % 282 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.