Sequence Similarity Clusters for the Entities in PDB 1MJ7

Entity #1 | Chains: L
IMMUNOGLOBULIN MS5-393 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39347
95 % 2 4 15522 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 25 33 1003
70 % 925 2553 1
50 % 1894 5180 1
40 % 2191 5834 1
30 % 2664 7269 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS5-393 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36281
95 % 4 4 15853 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 7 7 8312
70 % 913 2511 2
50 % 1895 5180 1
40 % 2192 5834 1
30 % 2665 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures