Sequence Similarity Clusters for the Entities in PDB 1MJ7

Entity #1 | Chains: L
IMMUNOGLOBULIN MS5-393 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41740
95 % 6 12 3888 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 25 33 995
70 % 905 2474 1
50 % 1848 5011 1
40 % 1848 5011 1
30 % 2107 5941 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS5-393 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41050
95 % 2 2 31471 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 7 7 7999
70 % 890 2424 2
50 % 1849 5011 1
40 % 1849 5011 1
30 % 2108 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures