Sequence Similarity Clusters for the Entities in PDB 1MJ7

Entity #1 | Chains: L
IMMUNOGLOBULIN MS5-393 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40057
95 % 6 12 3718 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 24 32 973
70 % 818 2287 1
50 % 1674 4633 1
40 % 1674 4633 1
30 % 1880 5461 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS5-393 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39396
95 % 2 2 30280 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 7 7 7660
70 % 807 2244 2
50 % 1675 4633 1
40 % 1675 4633 1
30 % 1881 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.