Sequence Similarity Clusters for the Entities in PDB 1MJ7

Entity #1 | Chains: L
IMMUNOGLOBULIN MS5-393 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40500
95 % 6 12 3763 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 25 33 968
70 % 847 2346 1
50 % 1731 4752 1
40 % 1731 4752 1
30 % 1943 5606 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS5-393 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39830
95 % 2 2 30603 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 7 7 7750
70 % 833 2299 2
50 % 1732 4752 1
40 % 1732 4752 1
30 % 1944 5606 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.