Sequence Similarity Clusters for the Entities in PDB 1MIU

Entity #1 | Chains: B
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 22 2128
95 % 2 22 2432 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 2 22 2507
70 % 2 22 2500
50 % 2 22 2479
40 % 2 22 2435
30 % 2 22 2283
Entity #2 | Chains: A
Breast Cancer type 2 susceptibility protein protein, length: 738 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62720
95 % 1 1 50995
90 % 1 2 24551
70 % 1 3 14959
50 % 1 3 13172
40 % 1 3 11811
30 % 1 3 10006

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures