Sequence Similarity Clusters for the Entities in PDB 1MIU

Entity #1 | Chains: B
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 18 2388
95 % 2 18 3039 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 2 18 3082
70 % 2 18 3052
50 % 2 18 3003
40 % 2 18 2956
30 % 2 18 2768
Entity #2 | Chains: A
Breast Cancer type 2 susceptibility protein protein, length: 738 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50863
95 % 1 1 37904
90 % 1 2 20960
70 % 1 2 19245
50 % 1 2 16731
40 % 1 2 14937
30 % 1 2 12823

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures