Sequence Similarity Clusters for the Entities in PDB 1MIU

Entity #1 | Chains: B
Deleted in split hand/split foot protein 1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 22 1896
95 % 2 22 2474 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 2 22 2536
70 % 2 22 2531
50 % 2 22 2517
40 % 2 22 2480
30 % 2 22 2364
Entity #2 | Chains: A
Breast Cancer type 2 susceptibility protein protein, length: 738 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51811
95 % 1 1 38573
90 % 1 2 21370
70 % 1 2 19606
50 % 1 2 17024
40 % 1 2 15187
30 % 1 2 13032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures