Sequence Similarity Clusters for the Entities in PDB 1MIQ

Entity #1 | Chains: A,B
plasmepsin protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35419
95 % 1 1 28245 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 1 1 27262
70 % 2 2 15624
50 % 3 4 7003
40 % 3 4 6517
30 % 666 737 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures