Sequence Similarity Clusters for the Entities in PDB 1MIO

Entity #1 | Chains: A,C
NITROGENASE MOLYBDENUM IRON PROTEIN (ALPHA CHAIN) protein, length: 533 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5972
95 % 5 5 6620 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 5 5 6596
70 % 5 5 6434
50 % 5 5 5985
40 % 5 5 5598
30 % 5 5 5035
Entity #2 | Chains: B,D
NITROGENASE MOLYBDENUM IRON PROTEIN (BETA CHAIN) protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6013
95 % 5 5 6665 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 5 5 6641
70 % 5 5 6481
50 % 5 5 6027
40 % 5 5 5634
30 % 6 6 4369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.