Sequence Similarity Clusters for the Entities in PDB 1MIO

Entity #1 | Chains: A,C
NITROGENASE MOLYBDENUM IRON PROTEIN (ALPHA CHAIN) protein, length: 533 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10861
95 % 3 3 10786 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 3 3 10647
70 % 3 3 10089
50 % 3 3 9152
40 % 3 3 8381
30 % 3 3 7371
Entity #2 | Chains: B,D
NITROGENASE MOLYBDENUM IRON PROTEIN (BETA CHAIN) protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 11067
95 % 3 3 10936 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 10790
70 % 3 3 10216
50 % 3 3 9251
40 % 3 3 8459
30 % 3 3 7437

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.