Sequence Similarity Clusters for the Entities in PDB 1MIM

Entity #1 | Chains: L
CHIMERIC SDZ CHI621 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22818
95 % 1 2 20398 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 14 2390
70 % 1332 2553 1
50 % 2728 5180 1
40 % 3122 5834 1
30 % 3832 7269 1
Entity #2 | Chains: H
CHIMERIC SDZ CHI621 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22819
95 % 1 2 20399 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 2 19811
70 % 1324 2511 2
50 % 2729 5180 1
40 % 3123 5834 1
30 % 3833 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures