Sequence Similarity Clusters for the Entities in PDB 1MIM

Entity #1 | Chains: L
CHIMERIC SDZ CHI621 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21516
95 % 1 2 18671 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 12 3013
70 % 1233 2362 1
50 % 2519 4781 1
40 % 2519 4781 1
30 % 2879 5635 1
Entity #2 | Chains: H
CHIMERIC SDZ CHI621 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21358
95 % 1 2 18563 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 2 18119
70 % 1222 2311 2
50 % 2520 4781 1
40 % 2520 4781 1
30 % 2880 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures