Sequence Similarity Clusters for the Entities in PDB 1MIM

Entity #1 | Chains: L
CHIMERIC SDZ CHI621 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21907
95 % 1 2 18964 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 13 2800
70 % 1264 2416 1
50 % 2581 4892 1
40 % 2581 4892 1
30 % 2951 5759 1
Entity #2 | Chains: H
CHIMERIC SDZ CHI621 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21746
95 % 1 2 18854 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 2 18392
70 % 1253 2366 2
50 % 2582 4892 1
40 % 2582 4892 1
30 % 2952 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures