Sequence Similarity Clusters for the Entities in PDB 1MIE

Entity #1 | Chains: L
IMMUNOGLOBULIN MS5-393 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39010
95 % 1 4 15405 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 19 33 999
70 % 622 2516 1
50 % 1279 5101 1
40 % 1505 5750 1
30 % 1845 7168 1
Entity #2 | Chains: H
IMMUNOGLOBULIN MS5-393 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35962
95 % 3 4 15736 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 5 7 8241
70 % 620 2475 2
50 % 1280 5101 1
40 % 1506 5750 1
30 % 1846 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures