Sequence Similarity Clusters for the Entities in PDB 1MI6

Entity #1 | Chains: A
peptide chain release factor RF-2 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 14 3899
95 % 15 15 3907
90 % 15 15 3970
70 % 15 15 3889
50 % 15 15 3787
40 % 36 36 1106
30 % 36 36 1089

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1GQE 1 A RELEASE FACTOR 2 562
2 1ZBT 1 A Peptide chain release factor 1 1309
3 1RQ0 1 A, B, C Peptide chain release factor 1 2336
4 2IHR 1 1 Peptide chain release factor 2 274
5 5DFE 3 QY, XY Peptide chain release factor 2 562
6 5J4D 35 JA, OC Peptide chain release factor 1 562
7 4V5J 24 AY, CY PEPTIDE CHAIN RELEASE FACTOR 2 RESIDUES 31-369 274
8 5J30 55 QY, XY Peptide chain release factor 1 562
9 6C5L 24 AY, CY Peptide chain release factor 2 274
10 5J3C 55 QY, XY Peptide chain release factor 1 562
11 4V5E 24 AY, CY PEPTIDE CHAIN RELEASE FACTOR 2 RESIDUES 6-356 274
12 2B3T 2 B Peptide chain release factor 1 562
13 4V9N 4 AY, CY Bacterial peptide chain release factor 2 (RF-2) 274
14 4V67 24 AX, CX Bacterial peptide chain release factor 2 (RF-2) 274
15 5CZP 54 QY, XY Peptide chain release factor 2 562
16 4V63 24 AX, CX Peptide chain release factor 1 274
17 4V7P 22 AV, DV Peptide chain release factor 1 274
18 4V4R 25 AY Peptide chain release factor 1 274
19 4V4S 25 AY Peptide chain release factor 2 274
20 6C4H 7 v Peptide chain release factor RF2 562
21 6C4I 55 v Peptide chain release factor 2 562
22 6BOH 35 JA, KA, OC, PC Peptide chain release factor 1 562
23 6BOK 55 GD, HD Peptide chain release factor 1 562
24 6B4V 35 JA, NC Peptide chain release factor 1 562
25 5U9F 39 Z Peptide chain release factor RF2 562
26 5U9G 39 Z Peptide chain release factor RF2 562
27 5U4I 53 v Peptide chain release factor 2 Gene Name(s): prfB ECK2886 JW5847 supK 562
28 5U4J 9 v Peptide chain release factor 2 Gene Name(s): prfB ECK2886 JW5847 supK 562
29 5MGP 56 z Peptide chain release factor 2 562
30 5MDV 7 7 Peptide chain release factor 2 562
31 5MDW 7 7 Peptide chain release factor 2 562
32 5MDY 7 7 Peptide chain release factor 2 274
33 5H5U 4 4 Peptide chain release factor 2 562
34 2FVO 1 A Peptide chain release factor 1 2336
35 1ML5 6 Z Peptide chain release factor 2 EM reconstruction of the backbone trace of the ribosome 562
36 1MI6 1 A peptide chain release factor RF-2 562