Sequence Similarity Clusters for the Entities in PDB 1MI6

Entity #1 | Chains: A
peptide chain release factor RF-2 protein, length: 365 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 14 3899
95 % 15 15 3907
90 % 15 15 3970
70 % 15 15 3889
50 % 15 15 3787
40 % 36 36 1106
30 % 36 36 1089

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1GQE 1 A RELEASE FACTOR 2 562
2 5DFE 3 QY, XY Peptide chain release factor 2 562
3 5CZP 54 QY, XY Peptide chain release factor 2 562
4 6C4H 7 v Peptide chain release factor RF2 562
5 6C4I 55 v Peptide chain release factor 2 562
6 5U9F 39 Z Peptide chain release factor RF2 562
7 5U9G 39 Z Peptide chain release factor RF2 562
8 5U4I 53 v Peptide chain release factor 2 Gene Name(s): prfB ECK2886 JW5847 supK 562
9 5U4J 9 v Peptide chain release factor 2 Gene Name(s): prfB ECK2886 JW5847 supK 562
10 5MDV 7 7 Peptide chain release factor 2 562
11 5MDW 7 7 Peptide chain release factor 2 562
12 5H5U 4 4 Peptide chain release factor 2 562
13 1ML5 6 Z Peptide chain release factor 2 EM reconstruction of the backbone trace of the ribosome 562
14 1MI6 1 A peptide chain release factor RF-2 562