Sequence Similarity Clusters for the Entities in PDB 1MHY

Entity #1 | Chains: B
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32893
95 % 1 2 26370 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 25496
70 % 1 2 23207
50 % 2 29 964
40 % 2 29 987
30 % 2 29 962
Entity #2 | Chains: D
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30985
95 % 1 2 25254 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 24429
70 % 2 29 911
50 % 2 29 959
40 % 2 29 984
30 % 2 29 959
Entity #3 | Chains: G
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42090
95 % 1 2 31842 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 30473
70 % 1 2 27289
50 % 2 29 973
40 % 2 29 998
30 % 2 29 970

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.