Sequence Similarity Clusters for the Entities in PDB 1MHY

Entity #1 | Chains: B
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33475
95 % 1 2 26856 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 25949
70 % 1 2 23531
50 % 2 29 974
40 % 2 29 997
30 % 2 29 969
Entity #2 | Chains: D
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31554
95 % 1 2 25741 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 24885
70 % 2 29 921
50 % 2 29 969
40 % 2 29 994
30 % 2 29 966
Entity #3 | Chains: G
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42734
95 % 1 2 32338 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 30933
70 % 1 2 27634
50 % 2 29 984
40 % 2 29 1008
30 % 2 29 979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.