Sequence Similarity Clusters for the Entities in PDB 1MHY

Entity #1 | Chains: B
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44730
95 % 1 2 37315 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 35604
70 % 1 2 31644
50 % 2 29 1029
40 % 2 29 1044
30 % 2 29 1039
Entity #2 | Chains: D
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36883
95 % 1 2 31382 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 30066
70 % 2 29 985
50 % 2 29 1028
40 % 2 29 1043
30 % 2 29 1038
Entity #3 | Chains: G
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34116
95 % 1 2 37316 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 35605
70 % 1 2 31645
50 % 2 29 1030
40 % 2 29 1045
30 % 2 29 1040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures